General information about the entry |
Entry location: | intron |
Position: | chr3:71104193-71104397  |
Length: | 205 nt |
Sequence: | FOXP1_Faust.fasta |
Overlapping gene: | FOXP1 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
FOXP1_cluster: chr3:70091768-71574384  |
External links: |
CONDOR database: | CRCNE00000888; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr12:16558082-16558284        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr6:99017984-99018188   Identity: 94.63%
   E-value: 3.8e-37   Bit-score: 160.2 |
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Armadillo (dasNov1): |
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Opossum (monDom5): | Region #1:   chr6:224802883-224803087   Identity: 93.66%
   E-value: 7.1e-32   Bit-score: 143.2 |
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Platypus (ornAna1): | Region #1:   chrX1:39523420-39523623   Identity: 98.04%
   E-value: 1.1e-40   Bit-score: 171.6 |
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Zebra_finch (taeGut1): | Region #1:   chr12:17278048-17278248   Identity: 96.55%
   E-value: 4.2e-38   Bit-score: 162.3 |
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Lizard (anoCar2): | Region #1:   chr2:180791804-180792006   Identity: 93.66%
   E-value: 1.9e-39   Bit-score: 167.2 |
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Painted_turtle (chrPic1): | Region #1:   JH584450:1127301-1127503   Identity: 96.59%
   E-value: 6.6e-37   Bit-score: 159.4 |
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Xenopus (xenTro3): | Region #1:   GL173040:184880-185080   Identity: 93.07%
   E-value: 1.2e-33   Bit-score: 147.8 |
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Fugu (fr2): | Region #1:   chrUn:216981458-216981641   Identity: 71.51%
   E-value: 5.7e-16   Bit-score: 83.7 |
This UCNE has 1 paralogous region in Fugu
Paralog #1:   chrUn:32949316-32949443   Identity: 67.97%
   E-value: 0.00000094   Bit-score: 53 |
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Medaka (oryLat2): | This UCNE has 1 paralogous region in Medaka
Paralog #1:   chr23:4538893-4539038   Identity: 64.9%
   E-value: 0.000015   Bit-score: 49.1 |
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Stickleback (gasAcu1): | Region #1:   chrXVII:13962931-13963101   Identity: 62.75%
   E-value: 0.000000069   Bit-score: 57 |
This UCNE has 1 paralogous region in Stickleback
Paralog #1:   chrIV:19072788-19072915   Identity: 67.97%
   E-value: 0.0000028   Bit-score: 51.7 |
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Tetraodon (tetNig2): | Region #1:   chr11:10989697-10989892   Identity: 66.67%
   E-value: 0.000000000031   Bit-score: 67.9 |
This UCNE has 1 paralogous region in Tetraodon
Paralog #1:   chr19:4815561-4815688   Identity: 67.97%
   E-value: 0.00000087   Bit-score: 53.2 |
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Zebrafish (danRer7): | Region #1:   chr6:43597844-43598002   Identity: 69.54%
   E-value: 0.000000035   Bit-score: 58.8 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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