General information about the entry |
Entry location: | intergenic |
Position: | chr3:137048367-137048732  |
Length: | 366 nt |
Sequence: | SOX14_Maxwell.fasta |
Upstream gene: | IL20RB |
Downstream gene: | SOX14 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
SOX14_cluster: chr3:136905247-137492079  |
External links: |
CONDOR database: | CRCNE00000753; |
VISTA Enhancer Browser: | hs209; |
UCE (Bejerano et al. 2004): | uc.124 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr9:5314069-5314436        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr9:100210707-100211071   Identity: 99.45%
   E-value: 9.6e-100   Bit-score: 369 |
|
Armadillo (dasNov1): | Region #1:   scaffold_10586:47409-47751   Identity: 99.71%
   E-value: 1e-88   Bit-score: 332.5 |
|
Opossum (monDom5): | Region #1:   chr4:99320579-99320946   Identity: 97.55%
   E-value: 2.2e-93   Bit-score: 348.3 |
|
Platypus (ornAna1): | Region #1:   Contig13601:3307-3674   Identity: 98.1%
   E-value: 4.1e-95   Bit-score: 353.2 |
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Zebra_finch (taeGut1): | Region #1:   chr9:5395187-5395554   Identity: 97.28%
   E-value: 1.2e-90   Bit-score: 337.7 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr9_random:67058-67414   Identity: 96.66%
   E-value: 1.4e-85   Bit-score: 320.9 |
|
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Lizard (anoCar2): | Region #1:   chr3:33423456-33423824   Identity: 95.93%
   E-value: 1.1e-92   Bit-score: 344.9 |
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Painted_turtle (chrPic1): | Region #1:   JH584753:3670363-3670730   Identity: 96.74%
   E-value: 2.7e-89   Bit-score: 334.2 |
|
Xenopus (xenTro3): | Region #1:   GL179915:305-603   Identity: 82.85%
   E-value: 3.7e-43   Bit-score: 180.2 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL172980:407046-407344   Identity: 82.85%
   E-value: 9e-43   Bit-score: 178.9 |
|
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Fugu (fr2): | Region #1:   chrUn:137175125-137175413   Identity: 88.24%
   E-value: 7.3e-66   Bit-score: 250.2 |
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Medaka (oryLat2): | Region #1:   chr4:4826857-4827145   Identity: 88.58%
   E-value: 2.9e-64   Bit-score: 245.1 |
|
Stickleback (gasAcu1): | Region #1:   chrVIII:3057780-3058068   Identity: 88.58%
   E-value: 2.2e-65   Bit-score: 248.9 |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): | Region #1:   chr6:26397779-26398068   Identity: 87.59%
   E-value: 2.4e-58   Bit-score: 226.2 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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