EPD migrates to a new URL:
See also: EPD news 2023-03-28

(id = 24700)

General information about the entry
Entry location:intergenic
Length:272 nt
Upstream gene:C3orf55
Downstream gene:SHOX2
Ultraconserved Genomic Regulatory Block (UGRB): SHOX2_cluster: chr3:157574121-158246256
External links:
CONDOR database:CRCNE00005656;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:24208255-24208527        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:66683972-66684244   Identity: 97.8%    E-value: 1.6e-65   Bit-score: 254.9

Armadillo (dasNov1):
Region #1:   scaffold_5155:48411-48683   Identity: 98.17%    E-value: 4.7e-60   Bit-score: 236.9

Opossum (monDom5):
Region #1:   chr7:244037222-244037495   Identity: 93.43%    E-value: 8.2e-54   Bit-score: 216.4

Platypus (ornAna1):
Region #1:   Ultra381:62439-62711   Identity: 97.07%    E-value: 6.8e-62   Bit-score: 242.4

Zebra_finch (taeGut1):
Region #1:   chr9:25978169-25978438   Identity: 96.67%    E-value: 5.9e-61   Bit-score: 238.6

Lizard (anoCar2):
Region #1:   chr3:14627293-14627566   Identity: 95.26%    E-value: 4.7e-63   Bit-score: 246.1
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584515:4813935-4814207   Identity: 96.7%    E-value: 2.6e-61   Bit-score: 240.8
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172686:2014222-2014496   Identity: 85.87%    E-value: 5.7e-44   Bit-score: 182.5

Fugu (fr2):
Region #1:   chrUn:34476079-34476298   Identity: 79.64%    E-value: 2.5e-34   Bit-score: 145.1

Medaka (oryLat2):
Region #1:   chr13:14718420-14718678   Identity: 75.19%    E-value: 2.5e-32   Bit-score: 138.5

Stickleback (gasAcu1):
Region #1:   chrI:8844509-8844719   Identity: 77.25%    E-value: 2.2e-29   Bit-score: 128.8

Tetraodon (tetNig2):
Region #1:   chr16:1134177-1134392   Identity: 80.18%    E-value: 7.3e-34   Bit-score: 143.5

Zebrafish (danRer7):
Region #1:   chr15:2074843-2075065   Identity: 80.44%    E-value: 1.4e-27   Bit-score: 123.6

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):