EPD migrates to a new URL:
See also: EPD news 2023-03-28

UCNE: SHOX2_Ursula
(id = 24735)

General information about the entry
Entry location:intron
Length:368 nt
Overlapping gene:RSRC1
Ultraconserved Genomic Regulatory Block (UGRB): SHOX2_cluster: chr3:157574121-158246256
External links:
CONDOR database:CRCNE00005619;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:24071747-24072114        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:67265119-67265486   Identity: 98.64%    E-value: 9.5e-88   Bit-score: 329.2

Armadillo (dasNov1):
Region #1:   scaffold_85911:3637-4004   Identity: 99.18%    E-value: 5.7e-82   Bit-score: 310.1

Opossum (monDom5):
Region #1:   chr7:243434574-243434940   Identity: 98.64%    E-value: 2.8e-82   Bit-score: 311.4

Platypus (ornAna1):
Region #1:   Contig10656:19010-19377   Identity: 98.64%    E-value: 8.2e-89   Bit-score: 332.2

Zebra_finch (taeGut1):
Region #1:   chr9:25838344-25838704   Identity: 96.4%    E-value: 6e-80   Bit-score: 302.1
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr3:14243343-14243707   Identity: 96.99%    E-value: 6.7e-88   Bit-score: 329.1

Painted_turtle (chrPic1):
Region #1:   JH584515:5265934-5266301   Identity: 98.91%    E-value: 2.5e-86   Bit-score: 324.4

Xenopus (xenTro3):
Region #1:   GL172686:1796989-1797354   Identity: 97.81%    E-value: 9.1e-83   Bit-score: 311.8

Fugu (fr2):
Region #1:   chrUn:34576147-34576471   Identity: 86.77%    E-value: 1.4e-68   Bit-score: 259.3

Medaka (oryLat2):
Region #1:   chr13:14875567-14875892   Identity: 85.89%    E-value: 8.4e-64   Bit-score: 243.5

Stickleback (gasAcu1):
Region #1:   chrI:8732119-8732447   Identity: 84.5%    E-value: 2.6e-62   Bit-score: 238.6

Tetraodon (tetNig2):
Region #1:   chrUn_random:74129383-74129737   Identity: 81.62%    E-value: 3.5e-64   Bit-score: 244.7

Zebrafish (danRer7):
Region #1:   chr15:2324976-2325303   Identity: 82.32%    E-value: 8.1e-51   Bit-score: 201.2

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):