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UCNE: SOX2_Achilles
(id = 24957)

General information about the entry
Entry location:intergenic
Position:chr3:180436793-180437382
Length:590 nt
Sequence:SOX2_Achilles.fasta
Upstream gene:CCDC39
Downstream gene:FXR1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:
VISTA Enhancer Browser:hs258;
UCE (Bejerano et al. 2004):uc.137 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18308001-18308590        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:33882710-33883299   Identity: 99.15%    E-value: 5.4e-118   Bit-score: 430.3

Armadillo (dasNov1):
Opossum (monDom5):
Region #1:   chr7:203881882-203882471   Identity: 97.97%    E-value: 2.7e-104   Bit-score: 385.2

Platypus (ornAna1):
Region #1:   Ultra347:265688-266277   Identity: 97.8%    E-value: 3.4e-123   Bit-score: 447.1

Zebra_finch (taeGut1):
Region #1:   chr9:19663096-19663685   Identity: 98.81%    E-value: 2.4e-116   Bit-score: 423.8

Lizard (anoCar2):
Region #1:   chr3:1584405-1584996   Identity: 95.44%    E-value: 3.9e-118   Bit-score: 430.2

Painted_turtle (chrPic1):
Region #1:   JH584502:3069325-3069911   Identity: 97.97%    E-value: 2e-115   Bit-score: 421.7

Xenopus (xenTro3):
Region #1:   GL172881:1456892-1457474   Identity: 92.09%    E-value: 1.7e-97   Bit-score: 361.4

Fugu (fr2):
Medaka (oryLat2):
Region #1:   chr4:20015952-20016398   Identity: 69.4%    E-value: 3e-40   Bit-score: 166

Stickleback (gasAcu1):
Region #1:   chrVIII:6048430-6048865   Identity: 71.98%    E-value: 1.6e-45   Bit-score: 183.5

Tetraodon (tetNig2):
Region #1:   chr1:21739758-21740252   Identity: 63.05%    E-value: 2.3e-32   Bit-score: 139.6

Zebrafish (danRer7):
Region #1:   chr22:40568042-40568563   Identity: 68.79%    E-value: 3.9e-41   Bit-score: 169.7

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):