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UCNE: SOX2_Apollo
(id = 24967)

General information about the entry
Entry location:intergenic
Position:chr3:180773963-180774598
Length:636 nt
Sequence:SOX2_Apollo.fasta
Upstream gene:DNAJC19
Downstream gene:SOX2OT
Paralogs:chr13:112037577-112037846: SOX1_Apollo;
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:CRCNE00001806;
VISTA Enhancer Browser:hs192;
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18226117-18226750        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34103957-34104596   Identity: 94.24%    E-value: 1.4e-126   Bit-score: 459
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_19124:25857-26492   Identity: 99.37%    E-value: 3.2e-130   Bit-score: 471.2

Opossum (monDom5):
Region #1:   chr7:204204965-204205599   Identity: 96.06%    E-value: 2.9e-124   Bit-score: 451.7
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra347:548434-549067   Identity: 98.11%    E-value: 1.6e-142   Bit-score: 511.4
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr9:19576884-19577516   Identity: 97.79%    E-value: 7.3e-130   Bit-score: 468.7
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr3:1450841-1451476   Identity: 96.54%    E-value: 6.2e-135   Bit-score: 486.1
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584502:3256348-3256980   Identity: 98.42%    E-value: 1.4e-135   Bit-score: 488.8
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL172881:1372075-1372709   Identity: 94.8%    E-value: 5.4e-123   Bit-score: 446.2
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:303428939-303429512   Identity: 80.73%    E-value: 8.1e-97   Bit-score: 353.9

Medaka (oryLat2):
Region #1:   chr4:19988008-19988544   Identity: 78.52%    E-value: 5e-77   Bit-score: 288.3

Stickleback (gasAcu1):
Region #1:   chrVIII:6071903-6072490   Identity: 80.27%    E-value: 6.2e-96   Bit-score: 351.1

Tetraodon (tetNig2):
Region #1:   chr1:21724577-21725152   Identity: 80.9%    E-value: 8e-99   Bit-score: 360.5

Zebrafish (danRer7):
Region #1:   chr22:40512098-40512708   Identity: 76.59%    E-value: 1e-66   Bit-score: 254.8
This UCNE has 2 paralogous regions in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):