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UCNE: SOX2_Frederica
(id = 24982)

General information about the entry
Entry location:intergenic
Length:435 nt
Upstream gene:DNAJC19
Downstream gene:SOX2OT
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:CRCNE00001841;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18124015-18124453        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34378698-34379133   Identity: 94.27%    E-value: 1.8e-94   Bit-score: 351.7

Armadillo (dasNov1):
Region #1:   scaffold_36246:321-750   Identity: 99.53%    E-value: 2e-99   Bit-score: 368.4

Opossum (monDom5):
Region #1:   chr7:204493481-204493914   Identity: 96.09%    E-value: 1.3e-94   Bit-score: 352.6

Platypus (ornAna1):
Region #1:   Ultra347:714812-715247   Identity: 98.62%    E-value: 4.8e-101   Bit-score: 373.1

Zebra_finch (taeGut1):
Region #1:   chr9:19475810-19476249   Identity: 95.91%    E-value: 6e-97   Bit-score: 358.9

Lizard (anoCar2):
Region #1:   chr3:1223301-1223721   Identity: 96.91%    E-value: 7.1e-102   Bit-score: 375.8

Painted_turtle (chrPic1):
Region #1:   JH584502:3438182-3438619   Identity: 96.58%    E-value: 5.9e-95   Bit-score: 353.3

Xenopus (xenTro3):
Region #1:   GL172881:1263211-1263621   Identity: 85.78%    E-value: 6.5e-67   Bit-score: 259.4

Fugu (fr2):
Region #1:   chrUn:303456030-303456361   Identity: 72.75%    E-value: 5.8e-38   Bit-score: 157.8

Medaka (oryLat2):
Region #1:   chr4:19937781-19938110   Identity: 73.49%    E-value: 1.5e-37   Bit-score: 156.5

Stickleback (gasAcu1):
Region #1:   chrVIII:6107100-6107430   Identity: 73.8%    E-value: 1.9e-39   Bit-score: 162.9

Tetraodon (tetNig2):
Region #1:   chr1:21700793-21701122   Identity: 73.27%    E-value: 1.5e-38   Bit-score: 159.8

Zebrafish (danRer7):
Region #1:   chr22:40444755-40445055   Identity: 75.99%    E-value: 5.1e-35   Bit-score: 149

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):