EPD migrates to a new URL:
https://epd.expasy.org
See also: EPD news 2023-03-28

UCNE: SOX2_Hannibal
(id = 24984)

General information about the entry
Entry location:intergenic
Position:chr3:181160651-181160881
Length:231 nt
Sequence:SOX2_Hannibal.fasta
Upstream gene:DNAJC19
Downstream gene:SOX2OT
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18107995-18108230        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34435346-34435575   Identity: 95.65%    E-value: 1.1e-39   Bit-score: 168.8

Armadillo (dasNov1):
Region #1:   scaffold_88350:2-145   Identity: 99.31%    E-value: 7e-22   Bit-score: 109.9

Opossum (monDom5):
Region #1:   chr7:204564797-204565027   Identity: 96.1%    E-value: 3.3e-36   Bit-score: 157.7

Platypus (ornAna1):
Region #1:   Ultra347:771123-771350   Identity: 98.25%    E-value: 4e-43   Bit-score: 179.8

Zebra_finch (taeGut1):
Region #1:   chr9:19455997-19456228   Identity: 95.26%    E-value: 1.1e-39   Bit-score: 167.8

Lizard (anoCar2):
Region #1:   chr3:1186986-1187214   Identity: 94.37%    E-value: 7.2e-42   Bit-score: 175.5

Painted_turtle (chrPic1):
Region #1:   JH584502:3479424-3479654   Identity: 95.24%    E-value: 6.9e-39   Bit-score: 166.1

Xenopus (xenTro3):
Region #1:   GL172881:1240311-1240533   Identity: 88.21%    E-value: 1.3e-31   Bit-score: 141.1

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):