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UCNE: SOX2_Julia
(id = 24992)

General information about the entry
Entry location:intergenic
Position:chr3:181215128-181215514
Length:387 nt
Sequence:SOX2_Julia.fasta
Upstream gene:DNAJC19
Downstream gene:SOX2OT
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18086119-18086518        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34465325-34465703   Identity: 89.03%    E-value: 7.5e-67   Bit-score: 259.8

Armadillo (dasNov1):
Region #1:   scaffold_223925:3308-3694   Identity: 97.93%    E-value: 2.2e-82   Bit-score: 311.6

Opossum (monDom5):
Region #1:   chr7:204621857-204622241   Identity: 86.82%    E-value: 1.4e-64   Bit-score: 252.7

Platypus (ornAna1):
Region #1:   Ultra347:820320-820705   Identity: 95.34%    E-value: 1.5e-83   Bit-score: 314.8

Zebra_finch (taeGut1):
Region #1:   chr9:19432633-19433018   Identity: 96.11%    E-value: 3.4e-81   Bit-score: 306.4
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr3:1151109-1151498   Identity: 90.77%    E-value: 1.1e-74   Bit-score: 285.3

Painted_turtle (chrPic1):
Region #1:   JH584502:3519782-3520180   Identity: 93.48%    E-value: 9.1e-80   Bit-score: 302.7

Xenopus (xenTro3):
Region #1:   GL172881:1218359-1218677   Identity: 79.51%    E-value: 1.5e-37   Bit-score: 161.6

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Region #1:   chr22:40420972-40421316   Identity: 68.09%    E-value: 7e-25   Bit-score: 115.1

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):