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UCNE: SOX2_Olivia
(id = 25006)

General information about the entry
Entry location:intron
Position:chr3:181343758-181344246
Length:489 nt
Sequence:SOX2_Olivia.fasta
Overlapping gene:SOX2OT
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:CRCNE00001824;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18027471-18027958        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34577725-34578219   Identity: 90.36%    E-value: 6.8e-63   Bit-score: 247

Armadillo (dasNov1):
Region #1:   scaffold_11462:35941-36230   Identity: 96.55%    E-value: 3.2e-31   Bit-score: 142

Opossum (monDom5):
Region #1:   chr7:204751283-204751770   Identity: 94.89%    E-value: 6e-49   Bit-score: 201.1

Platypus (ornAna1):
Region #1:   Ultra347:980895-981382   Identity: 95.71%    E-value: 1e-77   Bit-score: 295.8

Zebra_finch (taeGut1):
Region #1:   chr9:19376974-19377462   Identity: 97.96%    E-value: 2.5e-78   Bit-score: 297.2

Lizard (anoCar2):
Region #1:   chr3:1063150-1063638   Identity: 91.45%    E-value: 3.7e-72   Bit-score: 277.2

Painted_turtle (chrPic1):
Region #1:   JH584502:3616585-3617074   Identity: 95.92%    E-value: 8.7e-74   Bit-score: 283.1

Xenopus (xenTro3):
Region #1:   GL172881:1159484-1159938   Identity: 82.72%    E-value: 1.9e-48   Bit-score: 198.2

Fugu (fr2):
Region #1:   chrUn:303479715-303480105   Identity: 73.87%    E-value: 8.7e-38   Bit-score: 157.4

Medaka (oryLat2):
Region #1:   chr4:19878433-19878844   Identity: 70.77%    E-value: 5e-30   Bit-score: 131.7

Stickleback (gasAcu1):
Region #1:   chrVIII:6140177-6140587   Identity: 71.6%    E-value: 1.2e-33   Bit-score: 143.8

Tetraodon (tetNig2):
Region #1:   chr1:21677874-21678267   Identity: 73.37%    E-value: 6.1e-38   Bit-score: 157.9

Zebrafish (danRer7):
Region #1:   chr22:40365676-40366142   Identity: 80.56%    E-value: 2.4e-38   Bit-score: 160.2

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):