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UCNE: SOX2_Scout
(id = 25015)

General information about the entry
Entry location:intron
Length:237 nt
Overlapping gene:SOX2OT
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:18000849-18001085        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:34639915-34640149   Identity: 92.41%    E-value: 2.1e-53   Bit-score: 214.4

Armadillo (dasNov1):
Region #1:   scaffold_3105:11674-11909   Identity: 98.31%    E-value: 6.2e-61   Bit-score: 239.6

Opossum (monDom5):
Region #1:   chr7:204841539-204841774   Identity: 95.34%    E-value: 2.7e-59   Bit-score: 234.4

Platypus (ornAna1):
Region #1:   Contig21034:8677-8912   Identity: 97.46%    E-value: 1e-59   Bit-score: 235
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr9:19347082-19347317   Identity: 97.46%    E-value: 6e-59   Bit-score: 231.8

Lizard (anoCar2):
Region #1:   chr3:1002427-1002666   Identity: 80%    E-value: 2.5e-36   Bit-score: 157.1

Painted_turtle (chrPic1):
Region #1:   JH584502:3661970-3662206   Identity: 96.62%    E-value: 2.7e-58   Bit-score: 230.6

Xenopus (xenTro3):
Region #1:   GL172881:1132246-1132479   Identity: 89.36%    E-value: 7.6e-46   Bit-score: 188.5

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):