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UCNE: SOX2_Ursula
(id = 25044)

General information about the entry
Entry location:intergenic
Position:chr3:181861419-181861639
Length:221 nt
Sequence:SOX2_Ursula.fasta
Upstream gene:SOX2OT
Downstream gene:ATP11B
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): SOX2_cluster: chr3:180436793-182314792
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr9:17841650-17841870        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr3:35005251-35005470   Identity: 96.83%    E-value: 5.3e-48   Bit-score: 196.4

Armadillo (dasNov1):
Region #1:   scaffold_4886:149204-149424   Identity: 100%    E-value: 1.2e-47   Bit-score: 195.4

Opossum (monDom5):
Region #1:   chr7:205307303-205307527   Identity: 88.5%    E-value: 4.8e-35   Bit-score: 153.8

Platypus (ornAna1):
Region #1:   Ultra354:256346-256566   Identity: 96.38%    E-value: 4.9e-47   Bit-score: 192.7

Zebra_finch (taeGut1):
Region #1:   chr9:19181231-19181451   Identity: 95.48%    E-value: 1.1e-44   Bit-score: 184.2

Lizard (anoCar2):
Region #1:   chr3:707563-707786   Identity: 82.22%    E-value: 2.2e-30   Bit-score: 137.3

Painted_turtle (chrPic1):
Region #1:   JH584502:3949769-3949989   Identity: 95.93%    E-value: 5.4e-45   Bit-score: 186.3

Xenopus (xenTro3):
Region #1:   GL172881:957381-957589   Identity: 84.29%    E-value: 5.5e-30   Bit-score: 135.7
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Medaka (oryLat2):
Stickleback (gasAcu1):
Tetraodon (tetNig2):
Zebrafish (danRer7):
Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):