General information about the entry |
Entry location: | UTR |
Position: | chr10:93808466-93808962  |
Length: | 497 nt |
Sequence: | chr10_Sherlock.fasta |
Overlapping gene: | CPEB3 |
Paralogs: | chr16:8841115-8841502 chr4:15070988-15071423: CPEB2_Sherlock;
|
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr6:22152900-22153397        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr4:79773548-79773983   Identity: 67.64%
   E-value: 0.00000000000025   Bit-score: 81.1 |
|
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr19:37021365-37021859   Identity: 95%
   E-value: 7.6e-62   Bit-score: 243.6 |
This UCNE has 1 paralogous region in Mouse
Paralog #1:   chr5:43288937-43289372   Identity: 67.22%
   E-value: 0.0000000000002   Bit-score: 82.7 |
|
|
Armadillo (dasNov1): | Region #1:   scaffold_94059:1402-1899   Identity: 99.4%
   E-value: 2.7e-57   Bit-score: 228.6 |
This UCNE has 1 paralogous region in Armadillo
Paralog #1:   scaffold_14319:42866-43301   Identity: 66.74%
   E-value: 0.00000000016   Bit-score: 73.2 |
|
|
Opossum (monDom5): | Region #1:   chr1:79171171-79171668   Identity: 97.39%
   E-value: 5.3e-31   Bit-score: 141.5 |
This UCNE has 5 paralogous regions in Opossum
Paralog #1:   chr3:394938073-394938503   Identity: 82.22%
   E-value: 0.0000000000000014   Bit-score: 90.3 |
Paralog #2:   chr1:531646049-531646373   Identity: 86.09%
   E-value: 0.0000000000072   Bit-score: 78 |
Paralog #3:   chr3:413553811-413554274   Identity: 73.13%
   E-value: 0.00000000056   Bit-score: 71.7 |
Paralog #4:   chr4:335539153-335539423   Identity: 85.61%
   E-value: 0.000000022   Bit-score: 66.4 |
Paralog #5:   chr4:335538714-335538977   Identity: 82.71%
   E-value: 0.00000064   Bit-score: 61.5 |
|
|
Platypus (ornAna1): | Region #1:   Ultra110:616629-617118   Identity: 93.09%
   E-value: 2.1e-56   Bit-score: 225 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   chr4:57523592-57524027   Identity: 67.43%
   E-value: 0.000000000000067   Bit-score: 83.8 |
|
|
Zebra_finch (taeGut1): | Region #1:   chr6:19911637-19912136   Identity: 97.6%
   E-value: 1.2e-71   Bit-score: 275 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr4:56292189-56292624   Identity: 67.64%
   E-value: 0.0000000000000016   Bit-score: 88.6 |
|
|
Lizard (anoCar2): | This UCNE has 1 paralogous region in Lizard
Paralog #1:   chrUn_GL343513:229234-229688   Identity: 66.26%
   E-value: 0.00000000000011   Bit-score: 82.9 |
|
|
Painted_turtle (chrPic1): | Region #1:   JH584723:4410463-4410875   Identity: 96.63%
   E-value: 9.9e-46   Bit-score: 190 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584708:233136-233571   Identity: 67.85%
   E-value: 0.0000000000016   Bit-score: 79.6 |
|
|
Xenopus (xenTro3): | Region #1:   GL173080:593389-593904   Identity: 81.18%
   E-value: 1.5e-42   Bit-score: 178.7 |
This UCNE has 2 paralogous regions in Xenopus
Paralog #1:   GL182804:3188-3641   Identity: 82.9%
   E-value: 6.3e-39   Bit-score: 166.6 |
Paralog #2:   GL173029:961110-961572   Identity: 65.4%
   E-value: 0.00000000000021   Bit-score: 81.8 |
|
|
Fugu (fr2): | Region #1:   chrUn:358514858-358515274   Identity: 70.48%
   E-value: 7e-31   Bit-score: 134.5 |
This UCNE has 1 paralogous region in Fugu
Paralog #1:   chrUn:44578780-44579254   Identity: 65.87%
   E-value: 4e-20   Bit-score: 98.7 |
|
|
Medaka (oryLat2): | Region #1:   chr15:2275739-2276211   Identity: 73.54%
   E-value: 6.7e-29   Bit-score: 128 |
This UCNE has 1 paralogous region in Medaka
Paralog #1:   chr4:30515948-30516408   Identity: 66.05%
   E-value: 0.00000000000021   Bit-score: 76.6 |
|
|
Stickleback (gasAcu1): | Region #1:   chrVI:2236299-2236793   Identity: 79.12%
   E-value: 2.4e-45   Bit-score: 182.7 |
This UCNE has 1 paralogous region in Stickleback
Paralog #1:   chrVIII:18071069-18071534   Identity: 65.18%
   E-value: 7.3e-16   Bit-score: 84.8 |
|
|
Tetraodon (tetNig2): | This UCNE has 1 paralogous region in Tetraodon
Paralog #1:   chr1:11436224-11436691   Identity: 65.38%
   E-value: 3.8e-17   Bit-score: 88.9 |
|
|
Zebrafish (danRer7): | Region #1:   chr13:43130863-43131319   Identity: 68.58%
   E-value: 0.0000000000000037   Bit-score: 83.2 |
This UCNE has 1 paralogous region in Zebrafish
Paralog #1:   chr23:2184798-2185295   Identity: 67.11%
   E-value: 0.000000000036   Bit-score: 70 |
|
|
Lamprey (petMar1): |
|
Ciona_intestinalis (ci2): | Region #1:   scaffold_121:28349-28746   Identity: 58.19%
   E-value: 0.00000017   Bit-score: 58.9 |
Region #2:   scaffold_1407:603-1035   Identity: 56.7%
   E-value: 0.00000093   Bit-score: 56.5 |
Region #3:   chr12q:2940135-2940551   Identity: 57.27%
   E-value: 0.000002   Bit-score: 55.4 |
Region #4:   chr09q:3497212-3497722   Identity: 56.79%
   E-value: 0.0000029   Bit-score: 54.9 |
Region #5:   chr06q:2072847-2073211   Identity: 59.63%
   E-value: 0.0000041   Bit-score: 54.4 |
Region #6:   scaffold_280:7234-7658   Identity: 57.33%
   E-value: 0.0000096   Bit-score: 53.1 |
Region #7:   scaffold_167:96474-96924   Identity: 57.84%
   E-value: 0.000012   Bit-score: 52.9 |
Region #8:   scaffold_44:965792-966236   Identity: 59.22%
   E-value: 0.000018   Bit-score: 52.2 |
Region #9:   scaffold_167:93939-94416   Identity: 56.44%
   E-value: 0.000021   Bit-score: 52 |
Region #10:   scaffold_215:111842-112266   Identity: 57.49%
   E-value: 0.000029   Bit-score: 51.5 |
Region #11:   chr01p:1446141-1446586   Identity: 56.96%
   E-value: 0.000042   Bit-score: 51 |
Region #12:   chr07q:6880363-6880710   Identity: 60.06%
   E-value: 0.000042   Bit-score: 51 |
Region #13:   chr09q:3496239-3496693   Identity: 57.7%
   E-value: 0.000047   Bit-score: 50.8 |
Region #14:   chr08q:4010595-4011037   Identity: 57.73%
   E-value: 0.000047   Bit-score: 50.8 |
Region #15:   chr10q:2169738-2170165   Identity: 56.47%
   E-value: 0.000047   Bit-score: 50.8 |
Region #16:   scaffold_5665:2493-2960   Identity: 57.64%
   E-value: 0.000055   Bit-score: 50.6 |
Region #17:   chr09q:3494983-3495446   Identity: 56.24%
   E-value: 0.000059   Bit-score: 50.5 |
Region #18:   chr09q:3496784-3497208   Identity: 56.92%
   E-value: 0.000059   Bit-score: 50.5 |
Region #19:   chr06q:2071216-2071672   Identity: 56.16%
   E-value: 0.000075   Bit-score: 50.2 |
Region #20:   scaffold_119:149996-150432   Identity: 57.24%
   E-value: 0.000075   Bit-score: 50.2 |
Region #21:   scaffold_206:80401-80844   Identity: 57.02%
   E-value: 0.000084   Bit-score: 50 |
Region #22:   chr09q:677252-677691   Identity: 57.02%
   E-value: 0.000084   Bit-score: 50 |
Region #23:   chr14p:3448982-3449382   Identity: 57.57%
   E-value: 0.000094   Bit-score: 49.8 |
Region #24:   chr09q:3493229-3493700   Identity: 57.17%
   E-value: 0.000095   Bit-score: 49.8 |
Region #25:   scaffold_119:132763-133228   Identity: 57.17%
   E-value: 0.000095   Bit-score: 49.8 |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|