General information about the entry |
Entry location: | intron |
Position: | chr10:103139353-103139695  |
Length: | 343 nt |
Sequence: | LBX1_Daniel.fasta |
Overlapping gene: | BTRC |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
LBX1_cluster: chr10:102979179-103267608  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr6:24376832-24377173        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr19:45382709-45383051   Identity: 95.63%
   E-value: 4.9e-49   Bit-score: 200.5 |
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Armadillo (dasNov1): |
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Opossum (monDom5): | Region #1:   chr1:110896035-110896377   Identity: 96.22%
   E-value: 3.3e-39   Bit-score: 168.3 |
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Platypus (ornAna1): | Region #1:   chr17:776689-777031   Identity: 96.22%
   E-value: 1.5e-56   Bit-score: 224.9 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   chr17:776698-776980   Identity: 62.96%
   E-value: 0.00002   Bit-score: 55.1 |
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Zebra_finch (taeGut1): | Region #1:   chr6:22311473-22311813   Identity: 95.63%
   E-value: 1.8e-49   Bit-score: 200.8 |
This UCNE has 3 paralogous regions in Zebra_finch
Paralog #1:   chrUn:59149025-59149365   Identity: 95.63%
   E-value: 1.8e-49   Bit-score: 200.8 |
Paralog #2:   chrUn:59149033-59149314   Identity: 63.51%
   E-value: 0.000032   Bit-score: 53.8 |
Paralog #3:   chr6:22311481-22311762   Identity: 63.51%
   E-value: 0.000032   Bit-score: 53.8 |
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Lizard (anoCar2): | Region #1:   chrUn_GL343239:812915-813261   Identity: 93.39%
   E-value: 3.4e-53   Bit-score: 213.7 |
This UCNE has 1 paralogous region in Lizard
Paralog #1:   chrUn_GL343239:812967-813252   Identity: 62.75%
   E-value: 0.000017   Bit-score: 55.3 |
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Painted_turtle (chrPic1): | Region #1:   JH584547:3083342-3083683   Identity: 95.04%
   E-value: 4.7e-48   Bit-score: 197.2 |
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Xenopus (xenTro3): | Region #1:   GL172874:1118660-1118856   Identity: 71.22%
   E-value: 0.00000039   Bit-score: 60.4 |
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Fugu (fr2): |
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Medaka (oryLat2): |
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Stickleback (gasAcu1): |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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