Beguelin 2013, EZH2 maps in Large B-Cell Lymphoma cell lines.
EZH2 and H3K27me3 ChIP sequencing of mouse BCL1 cell lines transduced with Y641F EZH2.
- Raw data was downloaded from: SRA website
- Input file format: SRA
- Download date: 11-9-2018
From M. musculus (July 2007 NCBI37/mm9).
FASTQ files were extracted from SRA files using fastq-dump
v2.5.0) and mapped to the genome
files were then converted into bam
and to bed using bamToBed v2.12.0
conversion was carried out using bed2sga.pl
Béguelin W, Popovic R, Teater M, Jiang Y, Bunting KL, Rosen M, Shen H, Yang SN, Wang L, Ezponda T, Martinez-Garcia E, Zhang H, Zheng Y, Verma SK, McCabe MT, Ott HM, Van Aller GS, Kruger RG, Liu Y, McHugh CF, Scott DW, Chung YR, Kelleher N, Shaknovich R, Creasy CL, Gascoyne RD, Wong KK, Cerchietti L, Levine RL, Abdel-Wahab O, Licht JD, Elemento O, Melnick AM
EZH2 is required for germinal center formation and somatic EZH2 mutations promote lymphoid transformation.
Cancer Cell. 2013 May 13;23(5):677-92. doi: 10.1016/j.ccr.2013.04.011.
EZH2 is required for germinal center formation and somatic EZH2 mutations promote lymphoid transformation
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